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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs73202258 chr3:129101389 A/G PRHOXNB chr13:28552243-28562774:- 0.58 7.8 2.6E-10 Box Plot
ACC rs73229119 chr3:134543777 A/G PRHOXNB chr13:28552243-28562774:- 0.55 7.58 5.89E-10 Box Plot
ACC rs73229125 chr3:134547324 G/T PRHOXNB chr13:28552243-28562774:- 0.55 7.57 6.1E-10 Box Plot
ACC rs73229129 chr3:134547682 A/G PRHOXNB chr13:28552243-28562774:- 0.55 7.58 5.89E-10 Box Plot
ACC rs73229684 chr4:13432750 A/G PRHOXNB chr13:28552243-28562774:- 0.55 7.66 4.39E-10 Box Plot
ACC rs73232254 chr8:32037394 A/T PRHOXNB chr13:28552243-28562774:- 0.64 8.31 4.2E-11 Box Plot
ACC rs73237483 chr13:77513139 T/C PRHOXNB chr13:28552243-28562774:- 0.62 7.87 2.07E-10 Box Plot
ACC rs73260786 chr5:120328944 G/T GAGE2D chrX:49207160-49214420:+ 1.22 11.62 4.6E-16 Box Plot
ACC rs73260789 chr5:120329421 C/T GAGE2D chrX:49207160-49214420:+ 1.22 11.59 5.07E-16 Box Plot
ACC rs73284280 chr17:32518567 C/T TFDP3 chrX:132350697-132352376:- 0.99 8.59 1.52E-11 Box Plot
ACC rs73284292 chr17:32523541 G/C TFDP3 chrX:132350697-132352376:- 0.99 8.59 1.52E-11 Box Plot
ACC rs73324306 chr8:112842735 A/C KRT6C chr12:52862300-52867569:- 0.78 10.54 1.63E-14 Box Plot
ACC rs73324311 chr8:112845732 A/G KRT6C chr12:52862300-52867569:- 0.78 10.71 9.2E-15 Box Plot
ACC rs73324326 chr8:112851985 T/A KRT14 chr17:39738531-39743173:- 1.14 7.58 5.92E-10 Box Plot
ACC rs73324326 chr8:112851985 T/A KRT6C chr12:52862300-52867569:- 0.82 11.69 3.58E-16 Box Plot